fractaldna.dna_models.dnachain

Class description of a DNA chain built of base pairs

Classes

DNAChain(genome[, chain])	Inherits from PlottableSequence A single DNA Chain built from a genome specified.
DoubleDNAChain(genome, separation)	Inherits from DNAChain
EightStrandDNAChain(genome, sep1, sep2[, ...])	Construct eight DNA chains that can turn 90 degrees if turn=True
FourStrandDNAChain(genome, separation)	Inherits from DNAChain
FourStrandTurnedDNAChain(genome, separation)	Inherits from DNAChain
Histone(position, rotation[, genome, chain, ...])	Inherits from PlottableSequence
MultiSolenoidVolume([voxelheight, ...])	Class to build placement volumes that contain multiple solenoidal DNA strands.
PlottableSequence()	This is an inheritable class that gives DNA chains plotting methods and output methods.
Solenoid([voxelheight, radius, nhistones, ...])	Inherits from PlottableSequence
SplineLinker(bp1, bp2, bp3, bp4[, ...])	Inherits from PlottableSequence
TurnedDNAChain(genome)	Inherits from DNAChain
TurnedDoubleDNAChain(genome, separation)
TurnedSolenoid([voxelheight, radius, ...])	Inherits from Solenoid
TurnedTwistedDNAChain(genome)	Inherits from DNAChain
TurnedTwistedDoubleDNAChain(genome, separation)